Research Article
Molecular Cloning and Comparative Characterization of the Porcine Troponin I Family

Hua Yang, Zaiyan Xu, Zhixiong Ma, Yuanzhu Xiong, Changyan Deng and Bo Zuo

Animal Biotechnology, 2010, 21(1), 64-76. DOI: 10.1080/10495390903385983

Abstract

Troponin I (TnI) is a family of three muscle-specific myofibrillar proteins involved in calcium-sensitive regulation of contraction in cardiac and skeletal muscle. In this study, the full-length cDNA and genomic sequence of three genes of porcine TnI family were cloned and sequenced. The full-length cDNA of TNNI1, TNNI2, and TNNI3 genes were 989 bp, 734 bp, and 831 bp in length, which contained an open reading frame of 564, 549, and 636 nucleotides, respectively. Three Troponin I shared 54.4 ~ 58.3% similarity with each other in their predicted amino acid sequences. The TNNI1, TNNI2, and TNNI3 displayed the same genomic structure as other vertebrates and spanned over 9785 bp, 2373 bp, and 3648 bp genomic regions, respectively. The regulatory elements in the proximal promoter of TNNI2 and TNNI3 were conserved among human, mouse, and pig, but regulatory element differences existed in the TNNI1 promoter among them. Expression profiling showed that TnI genes were widely expressed in the tissues studied, with the highest expression level of TNNI1 and TNNI2 in skeletal muscle, and TNNI3 in cardiac muscle.

ASCI-ID: 259-61

View Fulltext

Similar Articles


Piggy-BACing the Human Genome I: Constructing a Porcine BAC Physical Map Through Comparative Genomics

Animal Biotechnology, 2008, 19(1), 28-42. DOI: 10.1080/10495390701807634

SNiPORK - A Microarray of SNPs in Candidate Genes Potentially Associated with Pork Yield and Quality - Development and Validation in Commercial Breeds

Animal Biotechnology, 2008, 19(1), 43-69. DOI: 10.1080/10495390701880946

A Comparative Study on the Efficiency of Two Enucleation Methods in Pig Somatic Cell Nuclear Transfer: Effects of the Squeezing and the Aspiration Methods

Animal Biotechnology, 2008, 19(2), 71-79. DOI: 10.1080/10495390701839264

cDNA Cloning and Tissue Expression Analyses of the Encoding Regions for Three Novel Porcine Genes- MJD1, CDC42 and NECD

Animal Biotechnology, 2008, 19(2), 117-121. DOI: 10.1080/10495390801896982

Molecular Characterization and SNP Development for the Porcine Il6 and Il10 Genes

Animal Biotechnology, 2008, 19(3), 159-165. DOI: 10.1080/10495390802088621

Molecular Cloning and Expression Analysis of CD82 in Pig

Animal Biotechnology, 2008, 19(4), 237-242. DOI: 10.1080/10495390802292363

Molecular Cloning and Expression Analysis of CD127 in Pig

Animal Biotechnology, 2009, 20(1), 40-45. DOI: 10.1080/10495390802594552

The Fat Mass and Obesity-Associated (FTO) Gene is Associated with Intramuscular Fat Content and Growth Rate in the Pig

Animal Biotechnology, 2009, 20(2), 58-70. DOI: 10.1080/10495390902800792

Nucleotide Sequence and Association Analysis of Pig Apolipoprotein-B and LDL-Receptor Genes

Animal Biotechnology, 2009, 20(3), 110-123. DOI: 10.1080/10495390902892518

Molecular Characterization of Five Porcine Candidate Genes for Drip Loss in Pork

Animal Biotechnology, 2010, 21(2), 114-121. DOI: 10.1080/10495390903534457

Investigation of Tissue-Specific Human Orthologous Alternative Splice Events in Pig

Animal Biotechnology, 2010, 21(4), 203-216. DOI: 10.1080/10495398.2010.497729

Mapping, CDNA Cloning and Tissue Expression of the Porcine Thyrotropin-Releasing Hormone Receptor Gene

Animal Biotechnology, 2011, 22(1), 30-36. DOI: 10.1080/10495398.2011.547745

Molecular Characterization and Different Expression Patterns of the Muscle Ankyrin Repeat Protein (MARP) Family During Porcine Skeletal Muscle Development in vitro and in vivo

Animal Biotechnology, 2011, 22(2), 87-99. DOI: 10.1080/10495398.2011.559562